Illumina MiSeq sequencing - SRA

ERX3281333: Illumina MiSeq sequencing
1 ILLUMINA (Illumina MiSeq) run: 11,899 spots, 1.6M bases, 897,818b downloads

Submitted by: INRA (Nouvelle-Aquitaine-Bordeaux)

Study: Sequence based microsatellite genotyping development for Alosa alosa and Alosa fallax.

PRJEB31908 • ERP114523 • All experiments • All runs

New microsatellite markers have been optimized for the development of a sequence based microsatellite genotyping approach. A total of 28 loci were amplified in a multiplexed PCR and sequenced for 156 individuals (from A. alosa, A. fallax and their hybrids) that were repeated to estimate genotyping error. Data were used as a proof of concept of the method and 24 high quality loci were validated. This method has then been applied to genotype additional individuals.

Sample: French_alosa_sample

SAMEA5538708 • ERS3340771 • All experiments • All runs

Organism: Alosa alosa

Library:

Name: unspecified

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: GENOMIC

Selection: PCR

Layout: SINGLE

Runs: 1 run, 11,899 spots, 1.6M bases, 897,818b

Run	# of Spots	# of Bases	Size	Published
ERR3254561	11,899	1.6M	897,818b	2019-05-28

ID:: 7931358

SRA

Sequence Read Archive

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